Infinium QC Array-24 Kit

High-throughput, cost-effective genotyping microarray for quality control, tracking, and stratification applications, including biobanking.

5,760 samples per week

Sample throughput

24 samples per array

Number of samples

Fixed markers: 15,949. Custom marker add-on capacity: None.

Number of markers

See full details in the specifications table

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Overview
Applications
Documentation
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Figures

Overview

The Infinium QC Array-24 Kit is a cost-effective way to perform sample identity, data interpretation¹, and quality validation for high-throughput genomics, biobanking, and other applications requiring confirmation of sample identification and quality. The Infinium QC Array-24 Kit offers 15,949 markers focused on high-value functional content.

Key markers include:

Sex determination
Ethnic ancestry
ADME (absorption, distribution, metabolism, and excretion)
Linkage analysis

The Infinium QC Array-24 Kit uses the Infinium 24-sample high-throughput screening (HTS) format. When used with Illumina array scanners, the Infinium QC Array-24 Kit enables the high accuracy and high-throughput genotyping required for quality control, tracking, and stratification applications.

View manifest (array content) files

Specifications

Assay type	Infinium HTS
Automation capability	Automated array loader, Liquid handling robot(s)
Description	This BeadChip consists of 15,949 markers focused on ADME, ethnic ancestry, linkage, and other categories that support sample tracking, quality control, and stratification for high-throughput genomics, biobanking, and other applications that require validation of sample identity and quality.
Input quantity	200 ng DNA
Instruments	iScan System
Method	High-throughput genotyping array, Targeted genotyping array
Nucleic acid type	DNA
Number of markers	Fixed markers: 15,949. Custom marker add-on capacity: None.
Number of samples	24 samples per array
Sample throughput	5,760 samples per week
Specialized sample types	FFPE tissue
Species category	Human
Technology	Microarray
Variant class	Single nucleotide polymorphisms (SNPs), Germline variants, Structural variants, Insertions-deletions (indels), Copy number variants (CNVs)

Required products

Match kit size to the number of samples in a run. Each kit is processed as a single batch and is not designed to be divided across multiple experiments. Order multiple small kits if processing several low-throughput batches.

/ Results

Applications

The Infinium QC Array-24 Kit supports 15,949 markers focused on high-value functional content, including sex determination, ethnicity, and linkage analysis, that enables cost-effective and high-throughput genotyping required for quality control, tracking, and stratification applications.

Example workflow

Select microarray

Infinium QC Array-24 Kit

Scan

iScan System

Analyze

GenomeStudio Software

Related applications and methods

Microarray data analysis and experimental design

Find microarray data analysis tools and tips to help you to visualize and analyze microarray data and facilitate data analysis for large experiments.

High-throughput genotyping

Large-scale genotyping with microarrays can identify variants associated with disease risk in large cohorts or populations.

Human genotyping

Human genotyping arrays are ideal for processing thousands of samples to identify variants associated with traits and disease.

Documentation

Product literature

Infinium QC Array v1.0 BeadChip
Product information sheet PDF < 1 MB

Support documentation

Infinium HTS Assay Auto Workflow Checklist Documentation

Infinium Assay Lab Setup and Best Practices Documentation

Infinium HTS Assay Manual Workflow Checklist Documentation

Illumina LIMS Project Manager Guide (15000396) Documentation

Infinium HTS Assay Manual Lab Tracking Form (15047409) Documentation

Infinium HTS Assay Reference Guide Documentation

Infinium LiHa and Infinium RoMa Operating Manual Documentation

Infinium Assay Consumables and Equipment List Documentation

Infinium HTS Automated Lab Tracking Form (15047410) Documentation

All Infinium QC Array-24 Kit Support

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Figures

Marker Category		Number of Markers
ADME		1009
Ancestry Informative		2910
Blood Group		1659
FingerprintSNPs		477
Linkage		5486
Extended MHC		930
Mitochondrial		141
Sex Chromosomes	X 1840	Y 1401	PAR 535

Infinium QC Array-24 v1.0 Kit marker information

The Infinium QC Array-24 v1.0 Kit offers markers focused on sex determination, ethnic ancestry, linkage, and several other categories.

Infinium QC Array-24 v1.0 Kit (48 samples)

20004347

The Infinium QC-Array-24 combines linkage, ancestry, sex determination, and functional markers to create a low cost, high throughput method for performing sample QC, tracking, validation, and stratification. Each Kit contains 2 BeadChips, along with reagents for amplifying, fragmenting, hybridizing, labeling and detecting 48 DNA samples

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Discounts:

Infinium QC Array-24 v1.0 Kit (288 samples)

20004348

The Infinium QC-Array-24 combines linkage, ancestry, sex determination, and functional markers to create a low cost, high throughput method for performing sample QC, tracking, validation, and stratification. Each Kit contains 12 BeadChips, along with reagents for amplifying, fragmenting, hybridizing, labeling and detecting 288 DNA samples

List Price:

Discounts:

Infinium QC Array-24 v1.0 Kit (1152 samples)

20004349

The Infinium QC-Array-24 combines linkage, ancestry, sex determination, and functional markers to create a low cost, high throughput method for performing sample QC, tracking, validation, and stratification. Each Kit contains 48 BeadChips, along with reagents for amplifying, fragmenting, hybridizing, labeling and detecting 1152 DNA samples

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References

1. Ponomarenko P, Ryutov A, Maglinte DT, Baranova A, Tatarinova TV, Gai X. Clinical utility of the low-density Infinium QC genotyping array in a genomics-based diagnostics laboratory. BMC Med Genomics. 2017;10(1). doi:10.1186/s12920-017-0297-7.

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Infinium QC Array-24 Kit

5,760 samples per week

24 samples per array

Fixed markers: 15,949. Custom marker add-on capacity: None.

Overview

Key markers include:

Specifications

Required products

What products do I need?

Applications

Example workflow

Select microarray

Scan

Analyze

Related applications and methods

Documentation

Product literature