BaseSpace Sequence Hub is the Illumina cloud-based genomics computing environment for next-generation sequencing (NGS) data management and analysis. Sequencing labs can store and share sequencing data, and researchers can simplify and accelerate NGS data analysis with push-button tools. Labs can also set-up and monitor their sequencing runs in real time on any Illumina instrument. BaseSpace Sequence Hub can be accessed via an intuitive web-based interface or Linux-based command line tool. For customers who need a local solution, we offer BaseSpace Onsite Sequence Hub.
BaseSpace Sequence Hub subscription tiers enable labs of all sizes to achieve maximum efficiency with tight instrument integration and simplified collaboration. We have three tiers of offerings.
|Storage||Up to 1 TB1||1 TB plus pay as you go||1 TB plus pay as you go|
|Compute||30 Day Free Trial2 of 250 complimentary Credits3||250 complimentary iCredits3 plus pay as you go||250 complimentary iCredits3 plus pay as you go|
|Premier Data Security and Privacy|
|Apps||Free apps only
(after trial period expires)
|Comprehensive Security Framework|
|Bioinformatics Professional Services Support||5 (8 hours)||
|Private Domain and Single Sign-on|
|Supports customers in a HIPAA regulated environment|
|Access Control & Audit|
|Price||Free||Contact a Sales Rep||Contact a Sales Rep|
1. Customers wanting to purchase additional storage must upgrade to Professional or Enterprise account
2. Customers wanting additional iCredits must upgrade to a Professional or Enterprise account
3. iCredits will be applied to users account upon launch of Compute Billing
4. Unlimited sharing and transfer apply only to Basic accounts under the 1 Tb storage quota.
5. Professional services are not included with the academic plans.
For Research Use Only. Not for use in diagnostic procedures.
BaseSpace Sequence Hub is the only bioinformatics platform that is directly connected to all Illumina sequencing instruments*.
Stream sequencing runs and store data immediately.
With BaseSpace Sequence Hub there is no need to set-up and maintain IT infrastructure to store and analyze your genomics data.
We offer scientific and technical consulting through our Services offering to help guide you through bioinformatics workflows. Bioinformatics Professional Services offers group and one-on-one sessions on topics including introduction to bioinformatics, how to use various BaseSpace Sequence Hub features to maximize productivity, in-depth discussions on specific NGS workflows, and assistance creating custom pipelines into BaseSpace Sequence Hub.
*HiSeqX does not connect to BaseSpace Onsite Sequence Hub
** Customers wanting to purchase additional storage must upgrade to Professional or Enterprise account
In addition to NGS data analysis, sample/run management, and cloud bioinformatics or onsite options, key features of BaseSpace Sequence Hub include:
* Customers wanting to purchase additional storage must upgrade to Professional or Enterprise account.
BaseSpace Sequence Hub offers a wide variety of powerful NGS data analysis apps, including:
In addition, BaseSpace Sequence Hub enables users to develop custom bioinformatics apps in BaseSpace Sequence Hub. App developers are able to keep apps private, share with collaborators, or submit for publication.
Together, these apps cover the common data analysis methods used with Illumina sequencing data. These methods include RNA-Seq, exome /enrichment, amplicon, whole-genome sequencing (WGS), amplicon, de novo assembly, 16S metagenomics, and more.
BaseSpace Onsite Sequence Hub is a local version of the BaseSpace Sequence Hub cloud bioinformatics solution that enables you to safely and securely store, share, and analyze NGS data from MiniSeq, MiSeq, MiSeqDx (in RUO mode), NextSeq 500, NextSeq 550, HiSeq 2500, HiSeq 3000, and HiSeq 4000 systems.
BaseSpace Sequence Hub Data Sheet View PDF Learn more about BaseSpace Sequence Hub highlights, tools, and applications.
Introduction to BaseSpace Sequence Hub View Video Learn how you can store and analyze your genomic research with ease, and effortlessly manage all of your sequencing runs.
Monitoring Instrument Performance View PDF BaseSpace Sequence Hub enables users to submit sequencing instrument operational data, so Illumina can monitor instrument performance and resolve unforeseen issues.
BaseSpace Sequence Hub White Paper View PDFBaseSpace Sequence Hub has a set of comprehensive policies and controls for data security and privacy.
BaseSpace Onsite Sequence Hub View Video BaseSpace Onsite Sequence Hub allows users to access their next-generation sequencing data anywhere.
BaseSpace Apps Quick Guide View PDF
BaseSpace Sequence Hub Support Find user guides, app release notes, and additional technical information. Access BaseSpace Sequence Hub Support
Immuno-oncology Informatics Apps Guide View PDF Informatics tools enable discovery and analysis with standard Illumina sequencing applications.
BaseSpace Sequence Hub is intended for research applications and not for any diagnostic or clinical use. It is intended to be used with Illumina research products only.